IL_8R3V_226

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

AGG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_226 not in the Motif Atlas

Geometric match to IL_3R1C_031

Geometric discrepancy: 0.1428

The information below is about IL_3R1C_031

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_08424.1

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

68

Unit IDs

8R3V|1|A2|A|831
8R3V|1|A2|G|832
8R3V|1|A2|G|833
*
8R3V|1|A2|C|853
8R3V|1|A2|U|854
8R3V|1|A2|U|855

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain B2

Small ribosomal subunit protein uS2

Chain R2

Small ribosomal subunit protein bS18

Chain U2

30S ribosomal protein S21