IL_8R3V_257

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

8R3V|1|72|U|846, 8R3V|1|72|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_257 not in the Motif Atlas

Homologous match to IL_5J7L_399

Geometric discrepancy: 0.4199

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

8R3V|1|72|A|844
8R3V|1|72|A|845
8R3V|1|72|U|846
8R3V|1|72|U|847
8R3V|1|72|C|848
*
8R3V|1|72|G|930
8R3V|1|72|U|931
8R3V|1|72|U|932
8R3V|1|72|A|933
8R3V|1|72|U|934

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 32

50S ribosomal protein L30