IL_8R3V_259

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGAACUAGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_259 not in the Motif Atlas

Homologous match to IL_4WF9_117

Geometric discrepancy: 0.0724

The information below is about IL_4WF9_117

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

8R3V|1|72|G|1666
8R3V|1|72|G|1667
8R3V|1|72|A|1668
8R3V|1|72|A|1669
8R3V|1|72|C|1670
8R3V|1|72|U|1671
8R3V|1|72|A|1672
8R3V|1|72|G|1673
8R3V|1|72|G|1674
*
8R3V|1|72|C|1990
8R3V|1|72|U|1991
8R3V|1|72|G|1992
8R3V|1|72|U|1993
8R3V|1|72|C|1994

Current chains

Chain 72

23S ribosomal RNA

Nearby chains