IL_8R3V_269

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

8R3V|1|A1|G|926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_269 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.1177

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.14

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

8R3V|1|A1|G|925
8R3V|1|A1|G|926
8R3V|1|A1|G|927
*
8R3V|1|A1|U|1390
8R3V|1|A1|U|1391

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain V2

messenger RNA