IL_8R3V_286

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUAC

Length

35 nucleotides

Bulged bases

8R3V|1|72|G|2133, 8R3V|1|72|C|2164, 8R3V|1|72|A|2171, 8R3V|1|72|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8R3V|1|72|G|2124
8R3V|1|72|G|2125
8R3V|1|72|A|2126
8R3V|1|72|G|2127
8R3V|1|72|G|2128
8R3V|1|72|C|2129
8R3V|1|72|U|2130
8R3V|1|72|U|2131
8R3V|1|72|U|2132
8R3V|1|72|G|2133
8R3V|1|72|A|2134
8R3V|1|72|A|2135
8R3V|1|72|G|2136
8R3V|1|72|U|2137
*
8R3V|1|72|A|2154
8R3V|1|72|U|2155
8R3V|1|72|G|2156
8R3V|1|72|G|2157
8R3V|1|72|A|2158
8R3V|1|72|G|2159
8R3V|1|72|C|2160
8R3V|1|72|C|2161
8R3V|1|72|G|2162
8R3V|1|72|A|2163
8R3V|1|72|C|2164
8R3V|1|72|C|2165
8R3V|1|72|U|2166
8R3V|1|72|U|2167
8R3V|1|72|G|2168
8R3V|1|72|A|2169
8R3V|1|72|A|2170
8R3V|1|72|A|2171
8R3V|1|72|U|2172
8R3V|1|72|A|2173
8R3V|1|72|C|2174

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain X2

Transfer RNA; tRNA

Chain a2

Large ribosomal subunit protein uL1