IL_8R55_002

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GU*AAC

Length

5 nucleotides

Bulged bases

8R55|1|A|A|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_002 not in the Motif Atlas

Homologous match to IL_5J7L_002

Geometric discrepancy: 0.166

The information below is about IL_5J7L_002

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

8R55|1|A|G|46
8R55|1|A|U|47
*
8R55|1|A|A|404
8R55|1|A|A|405
8R55|1|A|C|406

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain P

30S ribosomal protein S16