IL_8R55_027

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GUU*AAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GUU,AAC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_027 not in the Motif Atlas

Geometric match to IL_4V88_385

Geometric discrepancy: 0.1504

The information below is about IL_4V88_385

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

8R55|1|A|G|597
8R55|1|A|U|598
8R55|1|A|U|599
*
8R55|1|A|A|658
8R55|1|A|A|659
8R55|1|A|C|660

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain H

30S ribosomal protein S8

Chain O

30S ribosomal protein S15