IL_8R55_041

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GGG*UU

Length

5 nucleotides

Bulged bases

8R55|1|A|G|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_041 not in the Motif Atlas

Homologous match to IL_4LFB_036

Geometric discrepancy: 0.0893

The information below is about IL_4LFB_036

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

60

Unit IDs

8R55|1|A|G|935
8R55|1|A|G|936
8R55|1|A|G|937
*
8R55|1|A|U|1399
8R55|1|A|U|1400

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain V

mRNA (33-MER)