IL_8R55_070

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CGC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_070 not in the Motif Atlas

Geometric match to IL_4V88_424

Geometric discrepancy: 0.2916

The information below is about IL_4V88_424

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

8R55|1|X|C|18
8R55|1|X|G|19
8R55|1|X|C|20
*
8R55|1|X|G|566
8R55|1|X|U|567
8R55|1|X|G|568

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 0

50S ribosomal protein L32

Chain n

Large ribosomal subunit protein bL20

Chain r

Large ribosomal subunit protein uL22