IL_8R55_077
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- GGAACUG*CUAAGUAC
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R55_077 not in the Motif Atlas
- Geometric match to IL_5J7L_250
- Geometric discrepancy: 0.1109
- The information below is about IL_5J7L_250
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
8R55|1|X|G|191
8R55|1|X|G|192
8R55|1|X|A|193
8R55|1|X|A|194
8R55|1|X|C|195
8R55|1|X|U|196
8R55|1|X|G|197
*
8R55|1|X|C|204
8R55|1|X|U|205
8R55|1|X|A|206
8R55|1|X|A|207
8R55|1|X|G|208
8R55|1|X|U|209
8R55|1|X|A|210
8R55|1|X|C|211
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL35
- Chain i
- 50S ribosomal protein L15
- Chain v
- Large ribosomal subunit protein bL28
Coloring options: