IL_8R55_082

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GAG*CC

Length

5 nucleotides

Bulged bases

8R55|1|X|A|345

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_082 not in the Motif Atlas

Geometric match to IL_7A0S_012

Geometric discrepancy: 0.3855

The information below is about IL_7A0S_012

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

134

Unit IDs

8R55|1|X|G|344
8R55|1|X|A|345
8R55|1|X|G|346
*
8R55|1|X|C|359
8R55|1|X|C|360

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain t

Large ribosomal subunit protein uL24