IL_8R55_094
3D structure
- PDB id
- 8R55 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.57 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8R55|1|X|G|823, 8R55|1|X|A|835, 8R55|1|X|A|836
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R55_094 not in the Motif Atlas
- Geometric match to IL_4V9F_030
- Geometric discrepancy: 0.1137
- The information below is about IL_4V9F_030
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_57881.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8R55|1|X|G|822
8R55|1|X|G|823
8R55|1|X|G|824
*
8R55|1|X|C|834
8R55|1|X|A|835
8R55|1|X|A|836
8R55|1|X|U|837
8R55|1|X|C|838
Current chains
- Chain X
- 23S RNA (2887-MER)
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34
- Chain Z
- Large ribosomal subunit protein uL2
- Chain b
- Large ribosomal subunit protein uL4
- Chain r
- Large ribosomal subunit protein uL22
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