IL_8R55_132

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

UUAG*UGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_132 not in the Motif Atlas

Geometric match to IL_4LFB_060

Geometric discrepancy: 0.2

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.2

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

43

Unit IDs

8R55|1|X|U|1522
8R55|1|X|U|1523
8R55|1|X|A|1524
8R55|1|X|G|1525
*
8R55|1|X|U|1560
8R55|1|X|G|1561
8R55|1|X|A|1562
8R55|1|X|G|1563

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains