IL_8R55_140

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

8R55|1|X|G|1744

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_140 not in the Motif Atlas

Geometric match to IL_7RQB_068

Geometric discrepancy: 0.1098

The information below is about IL_7RQB_068

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_65969.2

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

8

Unit IDs

8R55|1|X|C|1731
8R55|1|X|G|1732
8R55|1|X|U|1733
8R55|1|X|A|1734
8R55|1|X|A|1735
8R55|1|X|C|1736
*
8R55|1|X|G|1741
8R55|1|X|G|1742
8R55|1|X|A|1743
8R55|1|X|G|1744
8R55|1|X|A|1745
8R55|1|X|A|1746
8R55|1|X|G|1747

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain Z

Large ribosomal subunit protein uL2