IL_8R55_162

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

UUC*GG

Length

5 nucleotides

Bulged bases

8R55|1|X|U|2431

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_162 not in the Motif Atlas

Homologous match to IL_4WF9_088

Geometric discrepancy: 0.2622

The information below is about IL_4WF9_088

Detailed Annotation

Single bulged U

Broad Annotation

No text annotation

Motif group

IL_97561.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

129

Unit IDs

8R55|1|X|U|2430
8R55|1|X|U|2431
8R55|1|X|C|2432
*
8R55|1|X|G|2443
8R55|1|X|G|2444

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 1

Large ribosomal subunit protein bL33

Chain i

50S ribosomal protein L15