IL_8R55_169

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

8R55|1|X|G|2605, 8R55|1|X|A|2606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R55_169 not in the Motif Atlas

Homologous match to IL_4WF9_095

Geometric discrepancy: 0.1649

The information below is about IL_4WF9_095

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

8R55|1|X|C|2539
8R55|1|X|U|2540
8R55|1|X|C|2541
*
8R55|1|X|G|2603
8R55|1|X|C|2604
8R55|1|X|G|2605
8R55|1|X|A|2606
8R55|1|X|G|2607

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 0

50S ribosomal protein L32

Chain a

Large ribosomal subunit protein uL3