IL_8R8M_158
3D structure
- PDB id
- 8R8M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GAAC*G(PSU)(PSU)C
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R8M_158 not in the Motif Atlas
- Homologous match to IL_5J7L_343
- Geometric discrepancy: 0.0509
- The information below is about IL_5J7L_343
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8R8M|1|a|G|2588
8R8M|1|a|A|2589
8R8M|1|a|A|2590
8R8M|1|a|C|2591
*
8R8M|1|a|G|2603
8R8M|1|a|PSU|2604
8R8M|1|a|PSU|2605
8R8M|1|a|C|2606
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain Y
- Transfer RNA; tRNA
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: