IL_8RCL_039

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CCCAGACAG*UCGAG

Length

14 nucleotides

Bulged bases

8RCL|1|72|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_039 not in the Motif Atlas

Homologous match to IL_5J7L_284

Geometric discrepancy: 0.0905

The information below is about IL_5J7L_284

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_99692.2

Basepair signature

cWW-tSS-tSH-L-R-R-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

8RCL|1|72|C|1043
8RCL|1|72|C|1044
8RCL|1|72|C|1045
8RCL|1|72|A|1046
8RCL|1|72|G|1047
8RCL|1|72|A|1048
8RCL|1|72|C|1049
8RCL|1|72|A|1050
8RCL|1|72|G|1051
*
8RCL|1|72|U|1108
8RCL|1|72|C|1109
8RCL|1|72|G|1110
8RCL|1|72|A|1111
8RCL|1|72|G|1112

Current chains

Chain 72

23S ribosomal RNA

Nearby chains