IL_8RCL_085

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GAUG*CUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_085 not in the Motif Atlas

Geometric match to IL_4K27_002

Geometric discrepancy: 0.3389

The information below is about IL_4K27_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

8RCL|1|72|G|2107
8RCL|1|72|A|2108
8RCL|1|72|U|2109
8RCL|1|72|G|2110
*
8RCL|1|72|C|2179
8RCL|1|72|U|2180
8RCL|1|72|U|2181
8RCL|1|72|U|2182

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain a2

Large ribosomal subunit protein uL1