3D structure

PDB id
8RCL (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli paused disome complex (Non-rotated disome interface class 1)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.49 Å

Loop

Sequence
AGAAUU*AGGAAU
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8RCL_151 not in the Motif Atlas
Geometric match to IL_4LFB_030
Geometric discrepancy: 0.1438
The information below is about IL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_04668.2
Basepair signature
cWW-cWW-cWW-L-R-L-R-cWW
Number of instances in this motif group
8

Unit IDs

8RCL|1|A1|A|673
8RCL|1|A1|G|674
8RCL|1|A1|A|675
8RCL|1|A1|A|676
8RCL|1|A1|U|677
8RCL|1|A1|U|678
*
8RCL|1|A1|A|712
8RCL|1|A1|G|713
8RCL|1|A1|G|714
8RCL|1|A1|A|715
8RCL|1|A1|A|716
8RCL|1|A1|U|717

Current chains

Chain A1
16S ribosomal RNA

Nearby chains

Chain F1
30S ribosomal protein S6
Chain K1
Small ribosomal subunit protein uS11
Chain R1
Small ribosomal subunit protein bS18

Coloring options:


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