IL_8RCL_164

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GCU*G(2MG)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_164 not in the Motif Atlas

Geometric match to IL_4KR9_002

Geometric discrepancy: 0.2171

The information below is about IL_4KR9_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

8RCL|1|A1|G|1050
8RCL|1|A1|C|1051
8RCL|1|A1|U|1052
*
8RCL|1|A1|G|1206
8RCL|1|A1|2MG|1207
8RCL|1|A1|C|1208

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain C1

Small ribosomal subunit protein uS3

Chain N1

Small ribosomal subunit protein uS14

Chain Y1

Transfer RNA; tRNA