IL_8RCL_177

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

8RCL|1|A1|C|1400, 8RCL|1|A1|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_177 not in the Motif Atlas

Geometric match to IL_5J7L_058

Geometric discrepancy: 0.1338

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

8RCL|1|A1|C|1399
8RCL|1|A1|C|1400
8RCL|1|A1|G|1401
*
8RCL|1|A1|C|1501
8RCL|1|A1|A|1502
8RCL|1|A1|A|1503
8RCL|1|A1|G|1504

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain V2

messenger RNA

Chain W1

Transfer RNA; tRNA