IL_8RCL_201

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

8RCL|1|A2|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_201 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1417

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

8RCL|1|A2|G|147
8RCL|1|A2|G|148
8RCL|1|A2|A|149
8RCL|1|A2|U|150
8RCL|1|A2|A|151
8RCL|1|A2|A|152
8RCL|1|A2|C|153
*
8RCL|1|A2|G|168
8RCL|1|A2|C|169
8RCL|1|A2|U|170
8RCL|1|A2|A|171
8RCL|1|A2|A|172
8RCL|1|A2|U|173
8RCL|1|A2|A|174
8RCL|1|A2|C|175

Current chains

Chain A2

16S ribosomal RNA

Nearby chains