IL_8RCL_259

3D structure

PDB id

8RCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.49 Å

Loop

Sequence

GGAACUAGG*CUGUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCL_259 not in the Motif Atlas

Homologous match to IL_5J7L_386

Geometric discrepancy: 0.0743

The information below is about IL_5J7L_386

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_22854.4

Basepair signature

cWW-tSH-cWW-tHW-R-L-cWW-L-L-R

Number of instances in this motif group

7

Unit IDs

8RCL|1|72|G|1666
8RCL|1|72|G|1667
8RCL|1|72|A|1668
8RCL|1|72|A|1669
8RCL|1|72|C|1670
8RCL|1|72|U|1671
8RCL|1|72|A|1672
8RCL|1|72|G|1673
8RCL|1|72|G|1674
*
8RCL|1|72|C|1990
8RCL|1|72|U|1991
8RCL|1|72|G|1992
8RCL|1|72|U|1993
8RCL|1|72|C|1994

Current chains

Chain 72

23S ribosomal RNA

Nearby chains