IL_8RCM_021

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GGG*CAAUC

Length

8 nucleotides

Bulged bases

8RCM|1|72|G|776, 8RCM|1|72|A|788, 8RCM|1|72|A|789

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_021 not in the Motif Atlas

Geometric match to IL_5J7L_265

Geometric discrepancy: 0.1119

The information below is about IL_5J7L_265

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_06549.2

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

8RCM|1|72|G|775
8RCM|1|72|G|776
8RCM|1|72|G|777
*
8RCM|1|72|C|787
8RCM|1|72|A|788
8RCM|1|72|A|789
8RCM|1|72|U|790
8RCM|1|72|C|791

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2

Chain l2

50S ribosomal protein L34

Chain p

Nascent chain