IL_8RCM_034

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CUAAG*CGAAG

Length

10 nucleotides

Bulged bases

8RCM|1|72|A|1156

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_034 not in the Motif Atlas

Homologous match to IL_4WF9_036

Geometric discrepancy: 0.0735

The information below is about IL_4WF9_036

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_08938.1

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

22

Unit IDs

8RCM|1|72|C|998
8RCM|1|72|U|999
8RCM|1|72|A|1000
8RCM|1|72|A|1001
8RCM|1|72|G|1002
*
8RCM|1|72|C|1153
8RCM|1|72|G|1154
8RCM|1|72|A|1155
8RCM|1|72|A|1156
8RCM|1|72|G|1157

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 32

50S ribosomal protein L30

Chain 82

5S ribosomal RNA; 5S rRNA