IL_8RCM_047

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CUGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

8RCM|1|72|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_047 not in the Motif Atlas

Homologous match to IL_5J7L_288

Geometric discrepancy: 0.1267

The information below is about IL_5J7L_288

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

8RCM|1|72|C|1208
8RCM|1|72|U|1209
8RCM|1|72|G|1210
8RCM|1|72|C|1211
8RCM|1|72|G|1212
8RCM|1|72|A|1213
8RCM|1|72|A|1214
8RCM|1|72|G|1215
*
8RCM|1|72|U|1234
8RCM|1|72|G|1235
8RCM|1|72|G|1236
8RCM|1|72|A|1237
8RCM|1|72|G|1238

Current chains

Chain 72

23S ribosomal RNA

Nearby chains