IL_8RCM_086

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_086 not in the Motif Atlas

Geometric match to IL_1MZP_001

Geometric discrepancy: 0.2466

The information below is about IL_1MZP_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_68118.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

27

Unit IDs

8RCM|1|72|C|2103
8RCM|1|72|C|2104
8RCM|1|72|U|2105
*
8RCM|1|72|A|2184
8RCM|1|72|U|2185
8RCM|1|72|G|2186

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain a2

Large ribosomal subunit protein uL1