IL_8RCM_146

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GUU*GGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_146 not in the Motif Atlas

Geometric match to IL_1ZH5_001

Geometric discrepancy: 0.1906

The information below is about IL_1ZH5_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

8RCM|1|A1|G|592
8RCM|1|A1|U|593
8RCM|1|A1|U|594
*
8RCM|1|A1|G|645
8RCM|1|A1|G|646
8RCM|1|A1|C|647

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain H1

Small ribosomal subunit protein uS8

Chain O1

30S ribosomal protein S15

Chain Q1

Small ribosomal subunit protein uS17