IL_8RCM_272

3D structure

PDB id

8RCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Non-rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.59 Å

Loop

Sequence

GGAA*UUUGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCM_272 not in the Motif Atlas

Geometric match to IL_1D4R_001

Geometric discrepancy: 0.2974

The information below is about IL_1D4R_001

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

8RCM|1|A1|G|75
8RCM|1|A1|G|76
8RCM|1|A1|A|77
8RCM|1|A1|A|78
*
8RCM|1|A1|U|91
8RCM|1|A1|U|92
8RCM|1|A1|U|93
8RCM|1|A1|G|94
8RCM|1|A1|C|95

Current chains

Chain A1

16S ribosomal RNA

Nearby chains