IL_8RCS_160

3D structure

PDB id

8RCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.46 Å

Loop

Sequence

UGUG*CGUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCS_160 not in the Motif Atlas

Geometric match to IL_4EYA_010

Geometric discrepancy: 0.3173

The information below is about IL_4EYA_010

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_51479.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

10

Unit IDs

8RCS|1|A1|U|835
8RCS|1|A1|G|836
8RCS|1|A1|U|837
8RCS|1|A1|G|838
*
8RCS|1|A1|C|848
8RCS|1|A1|G|849
8RCS|1|A1|U|850
8RCS|1|A1|G|851

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain B

Small ribosomal subunit protein uS2

Chain F1

30S ribosomal protein S6

Chain R1

Small ribosomal subunit protein bS18