IL_8RCS_286
3D structure
- PDB id
- 8RCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (Rotated disome interface class 1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.46 Å
Loop
- Sequence
- AGAAU*GGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RCS_286 not in the Motif Atlas
- Homologous match to IL_5J7L_361
- Geometric discrepancy: 0.0866
- The information below is about IL_5J7L_361
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
8RCS|1|A2|A|673
8RCS|1|A2|G|674
8RCS|1|A2|A|675
8RCS|1|A2|A|676
8RCS|1|A2|U|677
*
8RCS|1|A2|G|713
8RCS|1|A2|G|714
8RCS|1|A2|A|715
8RCS|1|A2|A|716
8RCS|1|A2|U|717
Current chains
- Chain A2
- 16S ribosomal RNA
Nearby chains
- Chain F2
- 30S ribosomal protein S6
- Chain K2
- Small ribosomal subunit protein uS11
- Chain R2
- Small ribosomal subunit protein bS18
- Chain U2
- 30S ribosomal protein S21
- Chain b2
- 50S ribosomal protein L2
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