IL_8RCT_026

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GCACU*AAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_026 not in the Motif Atlas

Homologous match to IL_5J7L_272

Geometric discrepancy: 0.1205

The information below is about IL_5J7L_272

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_26222.2

Basepair signature

cWW-cWS-cSH-tWH-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

8RCT|1|72|G|864
8RCT|1|72|C|865
8RCT|1|72|A|866
8RCT|1|72|C|867
8RCT|1|72|U|868
*
8RCT|1|72|A|909
8RCT|1|72|A|910
8RCT|1|72|A|911
8RCT|1|72|C|912

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 82

5S ribosomal RNA; 5S rRNA

Chain h2

50S ribosomal protein L16