IL_8RCT_038

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CCCAGACAG*UCGAG

Length

14 nucleotides

Bulged bases

8RCT|1|72|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_038 not in the Motif Atlas

Homologous match to IL_5J7L_284

Geometric discrepancy: 0.0927

The information below is about IL_5J7L_284

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_99692.2

Basepair signature

cWW-tSS-tSH-L-R-R-L-cWW-L-L

Number of instances in this motif group

6

Unit IDs

8RCT|1|72|C|1043
8RCT|1|72|C|1044
8RCT|1|72|C|1045
8RCT|1|72|A|1046
8RCT|1|72|G|1047
8RCT|1|72|A|1048
8RCT|1|72|C|1049
8RCT|1|72|A|1050
8RCT|1|72|G|1051
*
8RCT|1|72|U|1108
8RCT|1|72|C|1109
8RCT|1|72|G|1110
8RCT|1|72|A|1111
8RCT|1|72|G|1112

Current chains

Chain 72

23S ribosomal RNA

Nearby chains