IL_8RCT_048

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CUAAG*CGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_048 not in the Motif Atlas

Homologous match to IL_5J7L_292

Geometric discrepancy: 0.0638

The information below is about IL_5J7L_292

Detailed Annotation

UAA/GAN

Broad Annotation

UAA/GAN

Motif group

IL_89021.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8RCT|1|72|C|1351
8RCT|1|72|U|1352
8RCT|1|72|A|1353
8RCT|1|72|A|1354
8RCT|1|72|G|1355
*
8RCT|1|72|C|1376
8RCT|1|72|G|1377
8RCT|1|72|A|1378
8RCT|1|72|U|1379
8RCT|1|72|G|1380

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2

Chain l2

50S ribosomal protein L34