IL_8RCT_099

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

8RCT|1|72|G|2576, 8RCT|1|72|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_099 not in the Motif Atlas

Geometric match to IL_4WF9_095

Geometric discrepancy: 0.0915

The information below is about IL_4WF9_095

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

8RCT|1|72|C|2510
8RCT|1|72|U|2511
8RCT|1|72|C|2512
*
8RCT|1|72|G|2574
8RCT|1|72|C|2575
8RCT|1|72|G|2576
8RCT|1|72|A|2577
8RCT|1|72|G|2578

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain p

Nascent chain