IL_8RCT_130

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

8RCT|1|A1|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_130 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1552

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

8RCT|1|A1|G|147
8RCT|1|A1|G|148
8RCT|1|A1|A|149
8RCT|1|A1|U|150
8RCT|1|A1|A|151
8RCT|1|A1|A|152
8RCT|1|A1|C|153
*
8RCT|1|A1|G|168
8RCT|1|A1|C|169
8RCT|1|A1|U|170
8RCT|1|A1|A|171
8RCT|1|A1|A|172
8RCT|1|A1|U|173
8RCT|1|A1|A|174
8RCT|1|A1|C|175

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain T1

Small ribosomal subunit protein bS20