IL_8RCT_227

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GGGAG*UC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_227 not in the Motif Atlas

Homologous match to IL_4LFB_032

Geometric discrepancy: 0.1285

The information below is about IL_4LFB_032

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

8RCT|1|A2|G|774
8RCT|1|A2|G|775
8RCT|1|A2|G|776
8RCT|1|A2|A|777
8RCT|1|A2|G|778
*
8RCT|1|A2|U|804
8RCT|1|A2|C|805

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain 72

Large subunit ribosomal RNA; LSU rRNA

Chain K2

Small ribosomal subunit protein uS11

Chain b2

50S ribosomal protein L2