IL_8RCT_241

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GG*UCAUC

Length

7 nucleotides

Bulged bases

8RCT|1|A2|C|1200, 8RCT|1|A2|A|1201

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_241 not in the Motif Atlas

Homologous match to IL_4LFB_045

Geometric discrepancy: 0.1012

The information below is about IL_4LFB_045

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_95583.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

11

Unit IDs

8RCT|1|A2|G|1057
8RCT|1|A2|G|1058
*
8RCT|1|A2|U|1199
8RCT|1|A2|C|1200
8RCT|1|A2|A|1201
8RCT|1|A2|U|1202
8RCT|1|A2|C|1203

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain C2

Small ribosomal subunit protein uS3

Chain J2

30S ribosomal protein S10

Chain N2

Small ribosomal subunit protein uS14