IL_8RCT_243

3D structure

PDB id

8RCT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (Rotated disome interface class 2)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.32 Å

Loop

Sequence

GUC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RCT_243 not in the Motif Atlas

Geometric match to IL_4LFB_047

Geometric discrepancy: 0.1241

The information below is about IL_4LFB_047

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_28037.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

65

Unit IDs

8RCT|1|A2|G|1061
8RCT|1|A2|U|1062
8RCT|1|A2|C|1063
*
8RCT|1|A2|G|1193
8RCT|1|A2|U|1194
8RCT|1|A2|C|1195

Current chains

Chain A2

16S ribosomal RNA

Nearby chains

Chain C2

Small ribosomal subunit protein uS3

Chain E2

Small ribosomal subunit protein uS5

Chain J2

30S ribosomal protein S10

Chain N2

Small ribosomal subunit protein uS14

Chain V2

messenger RNA