IL_8RDV_121

3D structure

PDB id

8RDV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon, mRNA and P-site tRNA (structure 2).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGAUAGCU*AAUUAAUAC

Length

17 nucleotides

Bulged bases

8RDV|1|iN|U|218

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RDV|1|iN|G|192
8RDV|1|iN|G|193
8RDV|1|iN|A|194
8RDV|1|iN|U|195
8RDV|1|iN|A|196
8RDV|1|iN|G|197
8RDV|1|iN|C|198
8RDV|1|iN|U|199
*
8RDV|1|iN|A|212
8RDV|1|iN|A|213
8RDV|1|iN|U|214
8RDV|1|iN|U|215
8RDV|1|iN|A|216
8RDV|1|iN|A|217
8RDV|1|iN|U|218
8RDV|1|iN|A|219
8RDV|1|iN|C|220

Current chains

Chain iN

16S rRNA

Nearby chains

Chain To

Small ribosomal subunit protein bS20