IL_8RDV_131

3D structure

PDB id

8RDV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of P. urativorans 70S ribosome in complex with hibernation factor Balon, mRNA and P-site tRNA (structure 2).

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GAAGACU*ACGAUGAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RDV|1|iN|G|493
8RDV|1|iN|A|494
8RDV|1|iN|A|495
8RDV|1|iN|G|496
8RDV|1|iN|A|497
8RDV|1|iN|C|498
8RDV|1|iN|U|499
*
8RDV|1|iN|A|519
8RDV|1|iN|C|520
8RDV|1|iN|G|521
8RDV|1|iN|A|522
8RDV|1|iN|U|523
8RDV|1|iN|G|524
8RDV|1|iN|A|525
8RDV|1|iN|C|526

Current chains

Chain iN

16S rRNA

Nearby chains

Chain Pj

Small ribosomal subunit protein bS16