IL_8RJC_163
3D structure
- PDB id
- 8RJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome stalled on a 2-TMD rhodopsin intermediate in complex with Sec61-TRAP, open conformation 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.90061 Å
Loop
- Sequence
- UCGUACG*UUGAAA
- Length
- 13 nucleotides
- Bulged bases
- 8RJC|1|K|G|5041
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RJC|1|K|U|5003
8RJC|1|K|C|5004
8RJC|1|K|G|5005
8RJC|1|K|U|5006
8RJC|1|K|A|5007
8RJC|1|K|C|5008
8RJC|1|K|G|5009
*
8RJC|1|K|U|5039
8RJC|1|K|U|5040
8RJC|1|K|G|5041
8RJC|1|K|A|5042
8RJC|1|K|A|5043
8RJC|1|K|A|5044
Current chains
- Chain K
- 28S rRNA
Nearby chains
- Chain W
- Ribosomal protein L24
- Chain d
- 60S ribosomal protein L31
- Chain w
- Ribosomal protein L3
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