IL_8RL2_094
3D structure
- PDB id
- 8RL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human pre-60S - State 5
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.84 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 8RL2|1|L5|U|2880
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RL2_094 not in the Motif Atlas
- Homologous match to IL_8C3A_084
- Geometric discrepancy: 0.0832
- The information below is about IL_8C3A_084
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.4
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
8RL2|1|L5|C|2867
8RL2|1|L5|G|2868
8RL2|1|L5|U|2869
8RL2|1|L5|A|2870
8RL2|1|L5|A|2871
8RL2|1|L5|C|2872
*
8RL2|1|L5|G|2877
8RL2|1|L5|G|2878
8RL2|1|L5|A|2879
8RL2|1|L5|U|2880
8RL2|1|L5|A|2881
8RL2|1|L5|A|2882
8RL2|1|L5|G|2883
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain CB
- Nucleolar GTP-binding protein 2
- Chain CJ
- Ribosome production factor 2 homolog
- Chain CL
- Zinc finger protein 593
- Chain Lp
- 60S ribosomal protein L37a
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