IL_8RXH_010
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AU*AGUUGU
- Length
- 8 nucleotides
- Bulged bases
- 8RXH|1|L1|U|146
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_010 not in the Motif Atlas
- Geometric match to IL_5TBW_007
- Geometric discrepancy: 0.2392
- The information below is about IL_5TBW_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19724.3
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
8RXH|1|L1|A|122
8RXH|1|L1|U|123
*
8RXH|1|L1|A|143
8RXH|1|L1|G|144
8RXH|1|L1|U|145
8RXH|1|L1|U|146
8RXH|1|L1|G|147
8RXH|1|L1|U|148
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L7
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LG
- 60S ribosomal protein L7a
- Chain LM
- Ribosomal protein L15
Coloring options: