IL_8RXH_028
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GGC*GC
- Length
- 5 nucleotides
- Bulged bases
- 8RXH|1|L1|G|488
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_028 not in the Motif Atlas
- Geometric match to IL_4V88_442
- Geometric discrepancy: 0.264
- The information below is about IL_4V88_442
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
8RXH|1|L1|G|487
8RXH|1|L1|G|488
8RXH|1|L1|C|489
*
8RXH|1|L1|G|645
8RXH|1|L1|C|646
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L6
- SR6_chain_6
- Chain LF
- Putative 60S ribosomal protein L6
- Chain Lf
- 60S ribosomal protein L32
- Chain Lg
- Putative ribosomal protein l35a
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