IL_8RXH_052
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GU*GGC
- Length
- 5 nucleotides
- Bulged bases
- 8RXH|1|L1|G|911
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_052 not in the Motif Atlas
- Homologous match to IL_8C3A_032
- Geometric discrepancy: 0.0996
- The information below is about IL_8C3A_032
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
8RXH|1|L1|G|884
8RXH|1|L1|U|885
*
8RXH|1|L1|G|910
8RXH|1|L1|G|911
8RXH|1|L1|C|912
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain L2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L3
- SR1_chain_3
- Chain LA
- Putative 60S ribosomal protein L2
- Chain LQ
- Putative 60S ribosomal protein L19
- Chain Lo
- 60S ribosomal protein L37a
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