IL_8RXH_063
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- AGU*AU
- Length
- 5 nucleotides
- Bulged bases
- 8RXH|1|L1|G|1035
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_063 not in the Motif Atlas
- Homologous match to IL_8C3A_040
- Geometric discrepancy: 0.0967
- The information below is about IL_8C3A_040
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.7
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 49
Unit IDs
8RXH|1|L1|A|1034
8RXH|1|L1|G|1035
8RXH|1|L1|U|1036
*
8RXH|1|L1|A|1156
8RXH|1|L1|U|1157
Current chains
- Chain L1
- LSUa_rRNA_chain_1
Nearby chains
- Chain LP
- 60S ribosomal protein L18
- Chain LS
- Putative 60S ribosomal protein L21
- Chain Lb
- 60S ribosomal protein L29
- Chain Lc
- Putative 60S ribosomal protein L7
Coloring options: