IL_8RXH_105
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CGUAAG*CAAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 8RXH|1|L2|G|115
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_105 not in the Motif Atlas
- Geometric match to IL_5J7L_308
- Geometric discrepancy: 0.0929
- The information below is about IL_5J7L_308
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_47346.2
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
8RXH|1|L2|C|102
8RXH|1|L2|G|103
8RXH|1|L2|U|104
8RXH|1|L2|A|105
8RXH|1|L2|A|106
8RXH|1|L2|G|107
*
8RXH|1|L2|C|112
8RXH|1|L2|A|113
8RXH|1|L2|A|114
8RXH|1|L2|G|115
8RXH|1|L2|A|116
8RXH|1|L2|A|117
8RXH|1|L2|G|118
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Ln
- 60S ribosomal protein L41
- Chain Lo
- 60S ribosomal protein L37a
- Chain S1
- Small subunit ribosomal RNA; SSU rRNA
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