IL_8RXH_134
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GGGUUUAG*CACC
- Length
- 12 nucleotides
- Bulged bases
- 8RXH|1|L2|U|784
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_134 not in the Motif Atlas
- Geometric match to IL_8CRE_111
- Geometric discrepancy: 0.3937
- The information below is about IL_8CRE_111
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_68909.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
8RXH|1|L2|G|780
8RXH|1|L2|G|781
8RXH|1|L2|G|782
8RXH|1|L2|U|783
8RXH|1|L2|U|784
8RXH|1|L2|U|785
8RXH|1|L2|A|786
8RXH|1|L2|G|787
*
8RXH|1|L2|C|806
8RXH|1|L2|A|807
8RXH|1|L2|C|808
8RXH|1|L2|C|809
Current chains
- Chain L2
- LSUb_rRNA_chain_2
Nearby chains
- Chain L7
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LG
- 60S ribosomal protein L7a
Coloring options: